Files in the Dataset have been checked for format consistency, and merged into a single, integrated, downloadable file.
Download Entire Dataset Submit Data For This Cruise How to Cite DatasetCCHDO-1.0 CF netCDF files converted from bottle exchange file
CCHDO-1.0 CF netCDF files converted from ctd exchange file
2021-11-15
R Pillai
Submissions
id date submit by file name
---- ---------- --------- --------------------
2167 2021-11-15 2167_i01e_hy1.csv
2370 2021-11-15 2370_i01e_nc_hyd.zip
Conversions
file converted from software
--------------------- ------------------ -----------------
316N145_12_nc_hyd.zip 316N145_12_hy1.csv 0.8.2-61-g3353cfe
316N145_12_hy1.csv 2167_i01e_hy1.csv 0.8.2-61-g3353cfe
Updated Files Manifest
file stamp
--------------------- -----------------
316N145_12_nc_hyd.zip 20211115CCHSIORKP
316N145_12_hy1.csv 20211115CCHSIORKP
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
BTL
===================================================================================
316N145_12 processing - update units descriptions; BTL/merge - DELC13_FLAG_W,DELHER
===================================================================================
2014-05-14
SE
.. contents:: :depth: 2
Submission
==========
==================== ============ ========== ========= ====
filename submitted by date data type id
==================== ============ ========== ========= ====
i1check.txt.key.orig Robert M Key 2013-06-25 BTL 1023
==================== ============ ========== ========= ====
Parameters
----------
i1check.txt.key.orig
~~~~~~~~~~~~~~~~~~~~
- pressure
- tco2 [1]_
- tco2f
- alk [1]_
- alkf
- c14 [1]_
- c14e
- c14f
- c13num [3]_
- c13 [1]_
- c13f [4]_
.. [1] parameter has quality flag column
.. [2] parameter only has fill values/no reported measured data
.. [3] not in WOCE bottle file
.. [4] merged parameter, see notes below
Process
=======
Changes
-------
i01e_hy1.csv
~~~~~~~~~~~~
- STNNBR 1005, BTLNBR SIH001, PHSPHT,SILCAT,NITRAT,NITRIT flags changed from 2 to 4 (BTLNBR_FLAG_W is 3, these need flagging)
- THETA units changed from 'ITS-90' to 'DEG C', to comform to Exchange format
- CFC-11 units changed from 'PM/KG' to 'PMOL/KG', to comform to Exchange format
- CFC-12 units changed from 'PM/KG' to 'PMOL/KG', to comform to Exchange format
- ALKALI units changed from 'UMOL/K' to 'UMOL/KG', to correct unit typo
- HELIUM units changed from 'UMOL/KG' to 'NMOL/KG', to correct units to originally submitted units, 2000.10.17_I01E_TRITIUM_HELIUM_JENKINS/heformat.txt ( data values not changed )
i1check.txt.key.orig
~~~~~~~~~~~~~~~~~~~~
*NOTE*: File received (from Bob Key) with DELC13 values and flags for use in WOCE Indian Ocean Atlas.
Merged i1check.txt.orig into i01e_hy1.csv using hydro 0.8.0-31-g0e34600
:Updated parameters: DELC13_FLAG_W
i01ehy.txt
~~~~~~~~~~~~~
*NOTE*: There are 2 digits after the decimal in the original submission for DELHER, but the i01e_hy1.csv file reports 3 places after the decimal. Therefore, merged the WOCE formatted DELHER (which reports 2 digits after the decimal) into the i01e_hy1.csv file.
Merged DELHER into i01e_hy1.csv using hydro 0.8.0-53-g70387aa
:Updated parameters: DELHER
All comment lines from original file copied back in following merge.
Conversion
----------
==================== ================================ =================================
file converted from software
==================== ================================ =================================
i01e_nc_hyd.zip i01e_hy1.csv hydro 0.8.0-117-g2f13399
i01ehy.txt i01e_hy1.csv hydro 0.8.0-117-g2f13399
==================== ================================ =================================
Exchange and NetCDF files opened in JOA with no apparent problems.
Exchange file opened in ODV with no apparent problems.
Conversion
----------
=============== ============== =========================
file converted from software
=============== ============== =========================
i01e_nc_hyd.zip i01e_hy1.csv hydro 0.8.0-117-g2f13399
i01ehy.txt i01e_hy1.csv hydro 0.8.0-117-g2f13399
=============== ============== =========================
All converted files opened in JOA with no apparent problems.
Directories
===========
:working directory:
/data/onetime/indian/i01/i01e/original/2014.05.14_BTL_SE
:cruise directory:
/data/onetime/indian/i01/i01e
Updated Files Manifest
======================
=============== ================
file stamp
=============== ================
i01e_hy1.csv 20140514CCHSIOSE
i01e_nc_hyd.zip 20140514CCHSIOSE
i01ehy.txt
=============== ================
The following files are now available online under 'Files as received', unprocessed by the CCHDO.
i1check.txt.key.orig
Expocode: 316N145_12 Ship: None Woce Line: I02E Note: Merge DELC13 data, from Bob Key, that was used in making the WOCE Indian Ocean Atlas
Expocode: 316N145_11 Ship: None Woce Line: I01W Note: Merge DELC13 data from Bob Key, used for the WOCE Indian Ocean Atlas
Merge DELC13 data, from Bob Key, that was used in making the WOCE Indian Ocean Atlas
i01e and i01w
Found file i1he.txt in .../indian/i01/i01/original/2000.10.04_I1_BOTTLE. This file contains the deep DELHE3, HELIUM, NEON, DELHER, HELIER, and NEONER for i01e and i01w.
I merged these parameters into the online files, and made new exchangeand netcdf files. There were no Q1 or Q2 flags so I set them to 2.
Merged DELC13 decimal-2-data into bottle file. Merged new CTDPRS, CTDTMP, CTDSAL, CTDOXY, THETA, SALNTY & OXYGEN from WHOI into bottle file.
Notes on I01E merging Apr 16, 2003 D. Muus
1. Changed all Helium and Tritium quality flag "1"s associated with missing data to "9"s.
2. Merged DELC13 from:
/usr/export/html-public/data/onetime/indian/i01/i01e/original/
20020401.094935_GERLACH_I01E/20020401.094935_GERLACH_I01E_whpo_i01e.txt
into current web bottle file (20021005WHPOSIOSCD) to replace 1 decimal place data with 2 decimal place DELC13 data.
3. Merged CTDPRS, CTDTMP, CTDSAL, CTDOXY, THETA, SALNTY, & OXYGEN from:
Jane Dunworth, WHOI, email of March 24, 2004.
email data can be found in:
/usr/export/html-public/data/onetime/indian/i01/i01e/original/
2003.04.16.I01E_C13_CTDPTSO_SAL_OXY_MERGE_MUUS/
dunworth.email030324.i01e.btldata
Prior to merging, ITS-68 CTDTMP and THETA were changed to ITS-90 using ITS-90 = 0.99976(ITS-68) and CTDOXY and OXYGEN changed from ml/l to UMOL/KG using cvuwoce on minerva.ucsd.edu.
4. 2001/01/23 ANFUSO, S. note in Data History. "NUTRIENTS: Data was originally submitted in uM/L units, PI recalculated and resubmitted in uM/kg units. Also, original submission of nitrate data was actually nitrate nitrite. This error has been corrected in current data
submission."
Nutrients unchanged this version since only small changes in CTD pressure, salinity and temperature for samples with nutrient values.
5. Made new exchange file for Bottle data.
6. Checked new bottle file with Java Ocean Atlas.
*See DELC13 entry.
*See DELC 13 entry.
*See DELC13 entry.
*See DELC13 entry.
*See DELC13 entry.
*See DELC13 entry.
Fixed original WOCE formatted bottle file per Tim Boyer's (NODC/OCL) suggestions to me.
Units line:
This is the units line from i01e_hy1.csv:
DBAR,ITS-90,PSS-78,,PSS-78,,UMOL/KG,,UMOL/KG,,UMOL/KG,,UMOL/KG,,UMO L/KG,,UMOL/KG,,PM/K,,G
PM/K,,G T,,U UMOL/K,,PERCNT,,G /MILL,,/MILLE,,NMOL/KG,,E UMOL/K,,G
UMOL/K,,,/MILLE,NMOL/KG,PERCNT,NMOL/KG,ITS-90,TU"
Fixed units line, re-made HYD Exchange, NetCDF and inventories. Re-zipped all relevant files, checked in JOA3.1 (OSX), copied files to DVD 3.0 online site as well. Tarballed inventory, exchange, and NetCDF and sent to Shannon Niou of NODC for inclusion on the WOCE Version 3 DVD.
*See HE/TR entry.
*See HE/TR entry.
*See HE/TR entry.
*See HE/TR entry.
Merged the DELHE3, DELHER, HELIUM, HELIER, NEON, NEONER, TRITIUM, and TRITER from Jenkins. Made new exchange file.
Merge notes for i01e:
HE3, DELHER, HELIUM, HELIER, NEON, NEONER from file wihe.dat found in /usr/export/html-public/data/onetime/indian/i01/i01e/original/2000.10.17_I01E_TRITIUM_HELIUM_JENKINS into online file 20020813WHOPSIOSA.
Merged the TRITIUM and TRITER from file witrit.dat found in above directory into online file.
This merging had been done earlier by Stacey Anfuso but there is no rcs (at least I can't find it) and the file she merged appears not to have been put online or somehow was replaced with a file
that did not have these parameters.
*See ALKALI entry.
*See ALKALI entry.
*See ALKALI entry.
*See ALKALI entry.
Merged the DELC14 and C14ERR from Key, the DELC13 from Gerlach, the TCARBN and ALKAL from Kozyr, and the CFCs from Wisegarver. Made new exchange file.
Merge notes for i01e:
Merged the DELC14 and C14ERR from file I1.C14 found in /usr/export/ html-public/data/onetime/indian/i01/i01e/original/20020410_KEY_I1_C14 into the online file 20010927WHPOSIOSA.
Merged the DELC13 from file 20020401.094935_GERLACH_I01E_whpo_i01e.txt found in /usr/export/html-public/data/onetime/indian/i01/i01e/original/20020401.094935_GERLACH_I01E into the online file.
Merged the new TCARBN and ALKAKI from file i1ecarb.dat found in /usr/export/ html-public/data/onetime/indian/i01/i01e/original/2000.06.19_I1_CARB_KOZYR into online file.
Merged the new CFC's from file 20010918.165552_WISEGARVER_I01E_i01e_CFC_DQE.dat found in /usr/export/html-public/data/onetime/indian/i01/i01e/original/2001.09.18_
I01E_CFC_DQE_WISEGARVER into the online file.
Moved data from /usr/export/ftp-incoming to i01/i01e/original/20020410_KEY_I1_C14. It is a CSV file and I added the following heading to it:
#I01E/W,316N145_11-12,Key
Data belongs to both I01E and I01W.
Moved data from /usr/export/html-public/cgi/SUBMIT/INCOMING/20020401.094935_GERLACH_I01E to /usr/export/html-public/data/onetime/indian/i01/i01e/original/20020401.094935_GERLACH_I01E. Data contains a readme file from the data submission page and a file containing DELC13 data.
Date: Mon, 1 Apr 2002 09:49:35 -0800 (PST)
From: WHPO Website <http@odf.ucsd.edu>
To: dgerlach@whoi.edu, jrweir@whpo.ucsd.edu, whpo@ucsd.edu
Subject: WHPO DATA I01E: OTHER from GERLACH
This is information regarding line: I01E
ExpoCode:
Cruise Date: 1995/09/30 - 1995/10/16
From: GERLACH, DANA
Email address: dgerlach@whoi.edu
Institution: WHOI
Country: USA
The file: C:\My Documents\C13-project\whpo_indian_march02\whpo_i01e.txt - 2667 bytes
has been saved as: 20020401.094935_GERLACH_I01E_whpo_i01e.txt
in the directory: 20020401.094935_GERLACH_I01E
The data disposition is:
 Public
The file format is:
 Plain Text (ASCII)
The archive type is:
 NONE - Individual File
The data type(s) is:
 Other: flagged 13C data
The file contains these water sample identifiers:
 Cast Number (CASTNO)
 Station Number (STATNO)
 Bottle Number (BTLNBR)
GERLACH, DANA would like the following action(s) taken on the data:
 Merge Data
 Place Data Online
Any additional notes are:
 NOSAMS expocode affiliated with this line is: 316N145/11.
Any questions or concerns, please contact
 Dana Gerlach (dgerlach@whoi.edu) or
 Ann McNichol (amcnichol@whoi.edu).
I have placed the updated dqe'd CFC data sent by Wisegarver in the following directory
.../onetime/indian/i01/i01e/original/2001.09.18_I01E_CFC_DQE_WISEGARVER
included are data file and submission form README file. Data are in need of merging at this time.
The .sea file with the results of Arnold Mantyla's data quality evaluation and QUALT2 flags has been put online.
Corrected a couple of error in the .sum file and put new file online.
Jerry Kappa has been sent the DQ report.
Made new exchange file and put online.
created *check.txt file for the cruise created *.ps files for this cruise.
CTD has been converted to exchange using the new code and put online.
This is information regarding line: I01E
ExpoCode: 316N145_12
Cruise Date: 1995/08/29 - 1995/09/28
From: WISEGARVER, DAVID
Email address: wise@pmel.noaa.gov
Institution: NOAA
Country: USA
The directory this information has been stored in is:
20010918.165552_WISEGARVER_I01E
The format type is: ASCII
The data type is: BottleFile
The Bottle File has the following parameters:
CFC-11,CFC-12
The Bottle File contains:
CastNumber StationNumber BottleNumber SampleNumber
WISEGARVER, DAVID would like the data PUBLIC.
And would like the following done to the data: merge final dqe cfc's
Any additional notes are:
Submitted for D. Wyllie. CFC's on SIO98 Scale
CTD exchange files were put online.
Bottle exchange files was put online.
Merged TRITUM, TRITIER, HELIUM, HELIER, DELHE3, DELHER, NEON, NEONER from Sarilee's reformateed data files into hyd file.
Data merged ok.
NOTE: There were two values submitted for 979/1/25 (sta/cst/samp)
TRITUM and TRITIER. Only merged first value into hyd file.
Merged TRITUM, TRITIER, HELIUM, HELIER, DELHE3, DELHER, NEON, NEONER from Sarilee's reformateed data files into hyd file.
Data merged ok.
NOTE: There were two values submitted for 979/1/25 (sta/cst/samp)
TRITUM and TRITIER. Only merged first value into hyd file.
Converted CTDTMP from -68 to -90, changed header. Reformatted data columns in hyd file to comply with WOCE specs. Removed FCO2 column and associated Quality code (was '1').
ALSO, changed the quality codes for previously merged ALKALI and TCARBN data from '1' to '2' where data is present.
Realized after making other conversions, also needed to convert Theta from ITPS-68 to ITS-90. Used most up-to-date hyd file to make this conversion (multiplied all values by 0.99976).
Trying to straighten out the problems with i01ehy.txt.
Working on an updated copy of i01ehy.txt (ANDY_ROSS.i01ehy.nut) from Andy Ross at OSU. This is the same data as was previously on-line, but the nutrient data has been corrected for units (previously uM/L, now uM/kg).
Before putting this file back on-line, need to fix a few other problems:
a) CTDTMP units are in ITS-68, should be ITS-90. All data need to
be multiplied by 0.99976 to convert to ITS-90.
Need to update header.
b) OXYGEN and CTDOXY are in wrong units. Need to be converted from
ml/l to uM/kg.
Need to update headers.
THIS NEEDS TO BE DONE FIRST, before converting CTDTMP to ITS-90.
c) Formatting is incorrect for PO4, CFC11+12, OXYGEN and CTDOXY.
I have put the Jenkins helium and neon in WOCE format. There were no quality codes so I set the HELIUM, DELHE3, and NEON to 2.
Since the splitting of I01 into east and west lines, the ctd files for this cruise have remained as one zip file containing all stations for both east and west lines. As per Lynne Talley, I have split the east stations from the total zip file (stations 962-1014 according to the sumfile) and rezipped them. They have replaced the original file which was renamed to indicate it contains all stations and moved to the original directory.
I have put the final/public CO2-related data files for the Indian Ocean WOCE Section I1W and I1E to the WHPO ftp INCOMING area. There are two CO2 parameters in the files: Total CO2 and Total Alkalinity with quality flags.
i01esu.txt
Changed first header from R/V KNORR, I1,KN145, 11 to
R/V KNORR CR. KN145, LEG 12 WHP-ID I01E
Added time stamp
changed EXPOCODE from 316N145/11b to 316N145_12
changed WOCE SECT from I1 to I01E
latitude was not left justified, corrected this
deleted last record in file, it only had
The following stations had the wrong date. The cast started before midnight and ended after midnight according to the time but the date used was the same for the BE, BO, and EN event codes.
Sta. # Event Original Changed to
Code Date Date
966 EN 093095 100195
987 EN 100795 100895
996 EN 100995 101095
1002 EN 101095 101195
i1b.sea
Changed first header EXPOCODE and WHP-ID to conform with .sum file.
EXPOCODE 31ka45 to 316N145_12, and WHP-ID WOCE to I01E.
Changed CRUISE DATES 082995-101695 to 093095-101695
Added time stamp
Deleted last record in file, in only had
CHANGED FILE NAME TO i01ehy.txt