Files in the Dataset have been checked for format consistency, and merged into a single, integrated, downloadable file.
Download Entire Dataset Submit Data For This Cruise How to Cite DatasetCCHDO-1.0 CF netCDF files converted from bottle exchange file
CCHDO-1.0 CF netCDF files converted from ctd exchange file
I08S 2007 33RR20070204 processing - CTD merge CTDBEAMCP into existing Exchange file
2017-11-09
CCHDO
Submission
filename submitted by date id
------------ ------------ ---------- -----
2007I08S.TXT Wilf Gardner 2017-06-12 13491
2007I08S.TXT Wilf Gardner 2017-06-01 12756
i08s.zip Wilf Gardner 2009-05-22 1212
Changes
-------
i08s_33RR20070204_ct1.zip
- changed file names to conform to Exchange format
- merged CTDBEAMCP data from Wilf Gardner
- removed TRANSM and TRANSM_FLAG_W, no longer needed since CTDBEAMCP is available
- changed FLUORM to CTDCDOMFRAW
- changed FLUORM_FLAG_W to CTDCDOMFRAW_FLAG_W
- added header and unit comments
- added cruise comments
- changed SECT_ID value from I8S to I08S to match CCHDO Lines
- Station 75 did not have CTDBEAMCP data to merge, so used fill values.
2007I08S.TXT, ID 13491
- as per W.Gardner, removed CTDBEAMCP data from station 75 (only one bad sample)
2007I08S.TXT, ID 12756
- moved previous CTDBEAMCP data submission to Data History because an updated version was submitted.
i08.zip
- moved previous CTDBEAMCP data submission to Data History because an updated version was submitted.
i08s_33RR20070204ct.zip
- moved to Data History as this is not an up-to-date file including the CTDBEAMCP data
Conversion
----------
file converted from software
--------------------- ------------------ -----------------
33RR20070204_nc_ctd.zip 33RR20070204_ct1.zip 0.8.2-48-g594e1cb
Updated Files Manifest
----------------------
file stamp
--------------------- ----------------
33RR20070204_ct1.zip 20171109CCHSIO
33RR20070204_nc_ctd.zip 20171109CCHSIO
:Removed parameters: TRANSM, TRANSM_FLAG_W
:Merged parameters: CTDBEAMCP, CTDBEAMCP_FLAG_W
opened in JOA with no apparent problems:
33RR20070204_ct1.zip
33RR20070204_nc_ctd.zip
opened in ODV with no apparent problems:
33RR20070204_ct1.zip
As confirmed by Wilf Gardner and Alexey Mishonov the text related to transmissometer pathlength has been changed from 0.1m to 0.25m.
As confirmed by Wilf Gardner and Alexey Mishonov the text related to transmissometer pathlength has been changed from 0.1m to 0.25m.
Replaces previous submission of same name. W.Gardner CTDBEAMCP data.
Wilf Gardner's CTDBEAMCP final data to be merged
33RR20070204 processing - BTL/merge - TRITUM, TRITUM_FLAG_W, TRITER, FE, ALUMIN
2015-06-26
R Lee
Submission
filename submitted by date id
------------------------------------- ------------------------------ ------------- --------
LDEO_NGL_CliVarTritium4CCHDO_I8S.xlsx Robert Newton 2015-04-13 10141
33RR20070204.exc.csv Robert M. Key 2015-04-16 6511
I8S_Fe&Al.txt Maxime Grand & Chris Measures 2014-05-16 2854
Merge
-----
33RR20070204.exc.csv
Replaced 33RR20070204_hy1.csv with 33RR20070204.exc.csv (Robert M. Key 2015-04-16 6511)
:Updated parameters: TRITUM, TRITUM_FLAG_W, TRITER
I8S_Fe&Al.txt
New trace metals file create: 33RR20070204_tm_hy1.csv
:New parameters: FE, FE_FLAG_W, ALUMIN, ALUMIN_FLAG_W
33RR20070204_hy1.csv and 33RR20070204_tm_hy1.csv opened in JOA with no apparent problems.
Conversion
----------
file converted from software
--------------------------------------------------------------------
33RR20070204_nc_hyd.zip 33RR20070204_hy1.csv hydro 0.8.2-45-gbd78729
33RR20070204hy.txt 33RR20070204_hy1.csv hydro 0.8.2-45-gbd78729
Updated Files Manifest
----------------------
file stamp
-----------------------------------------
33RR20070204_hy1.csv 20150626CCHSIORJL
33RR20070204_nc_hyd.zip 20150626CCHSIORJL
33RR20070204hy.txt 20150626CCHSIORJL
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
There is not enough information to know where this file should go in the timeline.
The following data are now available As Received, unprocessed by the CCHDO.
http://cchdo.ucsd.edu/cruise/33RR20070204
33RR20070204.exc.csv
Expocode: 33RR20070204 Ship: None Woce Line: I8S Note: Merged recent H3 data from Schlosser
Expocode: 33RR20070204 Ship: None Woce Line: I8S Note: Tritium measurements from the I8Srepeat hydro cruise.
The following data are now available As Received, unprocessed by the CCHDO.
http://cchdo.ucsd.edu/cruise/33RR20070204
LDEO_NGL_CliVarTritium4CCHDO_I8S.xlsx
HE/H3/NEON
HE3/HE/NEON
====================================================================
I08S 2007 33RR20070204 processing - BTL/merge - HELIUM, DELHE3, NEON
====================================================================
2014-10-16
C Berys
.. contents:: :depth: 2
Submission
==========
=============================== ============= ========== =========== ====
filename submitted by date data type id
=============================== ============= ========== =========== ====
I8S_2007_LDEO_NGL_HeNeData.xlsx Robert Newton 2014-09-26 HE/H3/NEON 1224
33RR20070204.exc.csv Robert M. Key 2014-10-07 HE3/HE/NEON 1238
=============================== ============= ========== =========== ====
Parameters
----------
I8S_2007_LDEO_NGL_HeNeData.xlsx
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- DELHE3 [1]_ [4]_
- DELHER [3]_ [4]_
- He4ccSTPg
- He4ErccSTPg
- HELIUM [1]_ [4]_
- HELIER [3]_ [4]_
- NeccSTPg
- NeErccSTPg
- NEON [1]_ [4]_
- NEONER [3]_ [4]_
33RR20070204.exc.csv
~~~~~~~~~~~~~~~~~~~~
- CTDPRS
- CTDTMP
- CTDSAL [1]_
- SALNTY [1]_
- CTDOXY [1]_
- OXYGEN [1]_
- SILCAT [1]_
- NITRAT [1]_
- NITRIT [1]_
- PHSPHT [1]_
- CFC-11 [1]_
- CFC-12 [1]_
- CFC113 [1]_ [2]_
- TCARBN [1]_
- ALKALI [1]_
- HELIUM [1]_ [4]_
- DELHE3 [1]_ [4]_
- DELC13 [1]_
- DELC14 [1]_
- C14ERR
- NEON [1]_ [3]_ [4]_
- NEONER [3]_ [4]_
- DOC [1]_
- TDN [1]_ [3]_
- HELIER [4]_
- DELHER [4]_
- CDOM325 [1]_ [3]_
- CDOM340 [1]_ [3]_
- CDOM380 [1]_ [3]_
- CDOM412 [1]_ [3]_
- CDOMSL [1]_ [3]_
- CDOMSN [1]_ [3]_
.. [1] parameter has quality flag column
.. [2] parameter only has fill values/no reported measured data
.. [3] not in WOCE bottle file
.. [4] merged, see merge_
Process
=======
Changes
-------
33RR20070204_hy1.csv
~~~~~~~~~~~~~~~~~~~~
- renamed from i08_33RR20070204_hy1.csv
- fixed fill value for C14ERR at 55-1-20 and 42-1-4
.. _merge:
Merge
-----
I8S_2007_LDEO_NGL_HeNeData.xlsx
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Merged by Bob Key into 33RR20070204.exc.csv, see below.
33RR20070204.exc.csv
~~~~~~~~~~~~~~~~~~~~
New parameters merged by Bob Key into 33RR20070204.exc.csv.
Merged 33RR20070204.exc.csv into 33RR20070204_hy1.csv using hydro 0.8.2-40-g569f4c2.
:New parameters: HELIUM, HELIUM_FLAG_W, DELHE3, DELHE3_FLAG_W, NEON, NEON_FLAG_W, NEONER, HELIER, DELHER
All comment lines from original file copied back in following merge. 33RR20070204_hy1.csv opened in JOA with no apparent problems.
Conversion
----------
======================= ==================== =======================
file converted from software
======================= ==================== =======================
320620110219_nc_hyd.zip 320620110219_hy1.zip hydro 0.8.2-40-g569f4c2
320620110219hy.txt 320620110219_hy1.csv hydro 0.8.2-40-g569f4c2
======================= ==================== =======================
All converted files opened in JOA with no apparent problems.
Directories
===========
:working directory:
/data/co2clivar/indian/i08/i08s_33RR20070204/original/2014.10.16_HELIUM-H3-NEON_CBG
:cruise directory:
/data/co2clivar/indian/i08/i08s_33RR20070204
Updated Files Manifest
======================
======================= =================
file stamp
======================= =================
33RR20070204_hy1.csv 20141016CCHSIOCBG
33RR20070204hy.txt
33RR20070204_nc_hyd.zip 20141016CCHSIOCBG
======================= =================
He-3,He,Neon data recently submitted by Schlosser. Minor flag changes via QC
Expocode: 33RR20070204 Ship: Roger Revelle Woce Line: I8S.2007 Note: He-3,He,Neon data recently submitted by Schlosser. Minor flag changes via QC QC He 16-1-2 vhi vs P mark 3 Neon 8-1-4 vhi vs P 16-1-2 vhi vs P 16-1-3 vhi vs P
The following files are now available online under 'Files as received', unprocessed by the CCHDO.
33RR20070204.exc.csv
He-3,He,Neon data recently submitted by Schlosser. Minor flag changes via QC
QC
He
16-1-2 vhi vs P mark 3
Neon
8-1-4 vhi vs P
16-1-2 vhi vs P
16-1-3 vhi vs P
The following files are now available online under 'Files as received', unprocessed by the CCHDO.
I8S_2007_LDEO_NGL_HeNeData.xlsx
In the attachment the helium isotope ratios are reported in d3He, percent anomaly from atmospheric values. The concentration data for helium and neon are reported in both cc/g (STP) which is the laboratory standard, and in nanomoles per kg, the WOCE reporting standard.
Expocode: 33RR20070204 Ship: ROGER REVELLE Woce Line: I8S Note: In the attachment the helium isotope ratios are reported in d3He, percent anomaly from atmospheric values. The concentration data for helium and neon are reported in both cc/g (STP) which is the laboratory standard, and in nanomoles per kg, the WOCE reporting standard. The contact for these data is Robert Newton: 845-365-8686 (Lamont) or 201-679-0263 (cell).
In the attachment the helium isotope ratios are reported in d3He, percent anomaly from atmospheric values. The concentration data for helium and neon are reported in both cc/g (STP) which is the laboratory standard, and in nanomoles per kg, the WOCE reporting standard.
The contact for these data is Robert Newton: 845-365-8686 (Lamont)
The following files are now available online under 'Files as received', unprocessed by the CCHDO.
I8S_Fe&Al.txt
These data are the shipboard dissolved (<0.4 micrometers) Iron and Aluminium data generated using Flow Injection Analysis. These data are in tab-delimited format and contain: station number, cast number, longitude [degrees east], latitude [degree north], depth [meters], Iron [nmol/L], Aluminium [nmol/L] and associated quality flags. Quality flags are assigned using the WOCE quality codes for water sample measurements: 2: Acceptable Measurement, 3:Questionable Measurement, 4: Bad Measurement, 9:Sample not Drawn.
Expocode: 33RR20070204 Ship: Roger Revelle Woce Line: I08S Note: These data are the shipboard dissolved (<0.4 micrometers) Iron and Aluminium data generated using Flow Injection Analysis. These data are in tab-delimited format and contain: station number, cast number, longitude [degrees east], latitude [degree north], depth [meters], Iron [nmol/L], Aluminium [nmol/L] and associated quality flags. Quality flags are assigned using the WOCE quality codes for water sample measurements: 2: Acceptable Measurement, 3:Questionable Measurement, 4: Bad Measurement, 9:Sample not Drawn.
These data are the shipboard dissolved (<0.4 micrometers) Iron and Aluminium data generated using Flow Injection Analysis. These data are in tab-delimited format and contain: station number, cast number, longitude [degrees east], latitude [degree north], depth [meters], Iron [nmol/L], Aluminium [nmol/L] and associated quality flags. Quality flags are assigned using the WOCE quality codes for water sample measurements: 2: Acceptable Measurement, 3:Questionable Measurement, 4: Bad Measurement, 9:Sample not Drawn.
==============================
33RR20070204 processing - Maps
==============================
2014-01-16
R Lee
.. contents:: :depth: 2
Process
=======
Changes
-------
- Maps created from i08s_33RR20070204_hy1.csv
Directories
===========
:working directory:
/data/co2clivar/indian/i08/i08s_33RR20070204/original/2014.01.16_maps_RJL
:cruise directory:
/data/co2clivar/indian/i08/i08s_33RR20070204
Updated Files Manifest
======================
==================== =====
file stamp
==================== =====
33RR20070204_trk.jpg
33RR20070204_trk.gif
==================== =====
=============================
33RR20070204 processing - BTL
=============================
2014-01-10
R Lee
.. contents:: :depth: 2
Process
=======
Changes
-------
- Added instructions for citation use
Conversion
----------
============================ ========================= =======================
file converted from software
============================ ========================= =======================
i08s_33RR20070204_nc_hyd.zip i08s_33RR20070204_hy1.csv hydro 0.8.0-81-gc0a14ea
============================ ========================= =======================
All converted files opened in JOA with no apparent problems.
Directories
===========
:working directory:
/data/co2clivar/indian/i08/i08s_33RR20070204/original/2014.01.10_Citation_RJL
:cruise directory:
/data/co2clivar/indian/i08/i08s_33RR20070204
Updated Files Manifest
======================
- i08s_33RR20070204_nc_hyd.zip
- i08s_33RR20070204_hy1.csv
ALKALI
======================================================
I08S 2007 33RR20070204 processing - BTL/merge - ALKALI
======================================================
2013-05-21
C Berys
.. contents:: :depth: 2
Submission
==========
====================================== ============ ========== ========= ===
filename submitted by date data type id
====================================== ============ ========== ========= ===
i08s_33RR20070204_final_ALKALI_hy1.csv Kozyr, Alex 2013-02-19 ALKALI 955
====================================== ============ ========== ========= ===
Parameters
----------
i08s_33RR20070204_final_ALKALI_hy1.csv
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- CTDPRS
- CTDTMP
- CTDSAL [1]_
- SALNTY [1]_
- CTDOXY [1]_
- OXYGEN [1]_
- SILCAT [1]_
- NITRAT [1]_
- NITRIT [1]_
- PHSPHT [1]_
- CFC-11 [1]_
- CFC-12 [1]_
- CFC113 [1]_
- TCARBN [1]_
- ALKALI [1]_ [4]_
- PCO2 [1]_
- PCO2TMP
- DELC13 [1]_
- DELC14 [1]_
- C14ERR
- DOC [1]_
- TDN [1]_
- CTDRAW
- CDOM380 [1]_
- CDOM325 [1]_
- CDOMSL [1]_
- THETA
- CDOM340 [1]_
- CDOMSN [1]_
- CDOM412 [1]_
.. [1] parameter has quality flag column
.. [2] parameter only has fill values/no reported measured data
.. [3] not in WOCE bottle file
.. [4] merged, see merge_
Process
=======
Changes
-------
i08s_33RR20070204_final_ALKALI_hy1.csv
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
- station 66, cast 3, bottle 11, depth 1783.9 alkalinity value 2190.7 flag changed from 5 to 4
.. _merge:
Merge
-----
i08s_33RR20070204_final_ALKALI_hy1.csv
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Merged i08s_33RR20070204_final_ALKALI_hy1.csv into i08s_33RR20070204_hy1.csv using hydro 0.7.1.
:New parameters:
:Updated parameters: ALKALI, ALKALI_FLAG_W
All comment lines from original file copied back in following merge. i08s_33RR20070204_hy1.csv opened in JOA with no apparent problems.
Conversion
----------
============================ ========================= ======================
file converted from software
============================ ========================= ======================
i08s_33RR20070204_nc_hyd.zip i08s_33RR20070204_hy1.csv hydro 0.7.1
i08s_33RR20070204hy.txt i08s_33RR20070204_hy1.csv exchange_to_wocebot.rb
============================ ========================= ======================
All converted files opened in JOA with no apparent problems.
Directories
===========
:working directory:
/data/co2clivar/indian/i08/i08s_33RR20070204/original/2013.05.21_ALKALI_CBG
:cruise directory:
/data/co2clivar/indian/i08/i08s_33RR20070204
Updated Files Manifest
======================
- i08s_33RR20070204_nc_hyd.zip
- i08s_33RR20070204_hy1.csv
- i08s_33RR20070204hy.txt
The final and public Total Alkalinity data received at CDIAC from Andrew Dickson on 02/18/2013.
Expocode: 33RR20070204 Ship: R/V Revelle Woce Line: I08S_2007 Note: The final and public Total Alkalinity data received at CDIAC from Andrew Dickson on 02/18/2013. Please, merge the data and place online. Thank you, Alex.
The following files are now available online under 'Files as received', unprocessed by the CCHDO.
i08s_33RR20070204_final_ALKALI_hy1.csv
The final and public Total Alkalinity data received at CDIAC from Andrew Dickson on 02/18/2013. Please, merge the data and place online.
C14 and C13 values and flags were sent by Bob Key on 2008.09.02.
original files named
I08Sc14QC.csv. Minor edits to header were made to use with merging
script.
Updated CDOM sent by Norm Nelson on 2008.06.18. File header was
edited and file converted
to .csv in order to use with merging script.
TDN and DOC sent by Alex on 2008.03.14. File was ready to use with
merging script.
Used current exchange bottle file to merge data into. However because
the current file was created before the updated exchange converting
software
it is lacking PH, PCO2 and CDOM values because they were not
recognized by
the old software. This means these parameters are present in the WOCE
formatted
file, but not exchange. Upon inspecting the WOCE file, PH and PCO2
were not
reported. CDOM was reported but will however be getting updated
values which are
to replace the previously merged values.. Therefore, the current
exchange file
was able to be used for merging. The lack of PH and PCO2 values in the
file will
be confirmed with Alex.
Merged DELC14, C14ERR, DELC13 and flags using merge_exchange.rb with
no errors
detected during the merge.
Merged TDN and DOC and respective flags using merge_exchange.rb with
no errors
detected during merging.
Merged CDOM325,CDOM340,CDOM380,CDOM412,CDOMSL,CDOMSN and associated
flags using
merge_exchange.rb with no errors detected.
Final working merged file named
i08s_33RR20070204_mrgd_c14_doc_cdom_hy1.csv.
Renamed file to i08s_33RR20070204_hy1.csv. All merged results file
are named
i08s_33RR20070204_mrgdXXX_results where XXX equals each parameter
merged.
Created WOCE formatted and netCDF files with no errors generated
during conversion.
Viewed resultant files in JOA and plotted merged parameters, no
problems were
encountered.
Compared merged exchange file to previous unmerged file from both
online and from CDIAC
with no discrepancies.
Moved current online versions to original subdir and renamed. Placed
newly created files online
and ran cchdo_update script.
These data are beam attenuation numbers
Expocode: None Ship: None Woce Line: I08 Note: beam attenuation coeficients
Expocode: None Ship: None Woce Line: i08s Note: This is a resend of the file. It was not marked MERGE the first time and it was labeled i08, not i08s as it should be. Beam attenuation due to particles and depth. **This file is a duplicate. These data already reside in the "unprocessed" Queue directory.
Expocode: 33RR20070204 Ship: Revelle Woce Line: I8S Note: C14 and C13 data Check number of decimals for C13 against required QC by Key
C14 and C13 data
Check number of decimals for C13 against required
QC by Key
Expocode: 33RR20070204,33RR20070322 Ship: Roger Revelle Woce Line: I08S, I09N Note: Replaces previously submitted data based on updated instrument calibration
This replaces previously submitted data based on new instrument calibration.
Expocode: 33RR20070204 Ship: R/V Revelle Woce Line: I08S Note: Here are the I08S_2007 33RR20070204 final and public DOC and TN measurements to merge along with already submitted earlier TCARBN final data in case you did not merge them yet. Please, let me know when these data will be merged with the other parameters. Thank you, Alex.
Type: Status: public
Name: Kozyr, Alex
Institute: CDIAC/ORNL
Country: USA
Expo:33RR20070204 Line: I08S_2007
Date: 2007-02-04
Action:Merge Data, Place Online, Updated Parameters
Notes:Here are the I08S_2007 33RR20070204 final and public DOC and TDN measurements to merge along with already submitted earlier TCARBN final data in case you did not merge them yet.
20071008 DBK
Merging notes for TCARBN into i08s_2007
TCO2 data was submitted by Alex Kozyr on 09.18.2007
Data were in .csv format, however they were first
merged into the WOCE formatted bottle file then
the file was converted to exchange format.
There were no errors encountered during merging of
these data into the WOCE formatted bottle file,
however the format of the file could not be checked
using wocecvt due to the non-WOCE parmaters included
in the file.
The WOCE bottle file converted to exchange format with
no errors.
The following columns were not included:
CDOM
CDOMCDOMSLOGCDOMSNLF
CDOMCDOMSLOGCDOMSNLF_FLAG_W
CDOM_FLAG_W
PCO2_20
PH_UM
PH_UM_FLAG_W
PH_UM_T
PH_USFPH_USF_T
PH_USFPH_USF_T_FLAG_W
The exchange file (which excluded the above parameters)
was converted to netcdf with no errors.
At this time there is no citation information in the
exchange or netcdf files for this cruise. Once the
citation is created I will prepend it to the exchange
file and zip it with the netcdf files.
New files were placed online and old files were moved
to the original directory
Expocode: 33RR20070204 Ship: R/V Revelle Woce Line: I08S Note: Here is the final and public TCO2 data and flags, please merge to the general file. Please, let me know when the data will be merged. Thank you, Alex.
Type: Status: public
Name: Kozyr, Alex
Institute: CDIAC/ORNL
Country: USA
Expo:33RR20070204 (I08S_2007) Line: I08S_2007
Date: 2007-02-04
Action:Merge Data, Place Online
Notes:Here is the final and public TCO2 data and flags, please merge
to the general file. Please, let me know when the data will be merged.
The data are online, as I just showed you, but discovery of those data seems to be there problem here.
Justin and I are switching over to the newer system this weekend and that should make finding these online data much easier. If you have any questions about this procedure, just let me know.
I just put i08s_2007.do.txt in my public directory on the old cchdo.ucsd.edu. Would you put it into the correct directory and let me know when it's online?
All the I8S/I9N WHP-format data files are on the "donald" computer.
We may rewrite the ".sea" files to report collected-but-not-yet- analyzed samples before all is said and done. It means modifying the database, I'll keep you posted.
Here is the Argo text for the I8S report. I have also attached a version of the cruise report where it has been added (the only change from the version I sent you earlier).
Here's a pdf report of Jim's 2007 i08s cruise that should work for now. No links or data processing notes, but all the PI and ODF documentation is there.
Here are the two main pieces for the I8S report. If you can get the ODF report into the main document, I can edit it for the overlaps.
I am still waiting for the Argo report, but have indicated where it will go.
Written by Chris Sabine, provided by J.Swift:
do not put these on line as is, but OK to use info from them. - jim