Files in the Dataset have been checked for format consistency, and merged into a single, integrated, downloadable file.
Download Entire Dataset Submit Data For This Cruise How to Cite DatasetFiles listed here are the most recent version submitted by the cruise scientists, but have not yet been checked for consistency and merged into the main Dataset. They are provided "as is". If you are unsure of which files to use, stick to the Dataset files above.
These files are not yet in the Dataset.
| Filename (Download) | Size | Date Submitted |
| A16N_TMCbottle_only_2024-12-05.txt | 76.9 kB | 2025-01-15 |
File replaced by A16N_ODFbottle_only_2024-12-05.txt (42545) submitted by Mariko Hatta on 2025-01-15
File replaced by A16N_ODFbottle_only_2024-12-05.txt (42545) submitted by Mariko Hatta on 2025-01-15
Updated trace metals data submitted by Mariko Hatta via email.
Trace metal data received via email from Mariko Hatta.
File created in the CCHDO system
File created in the CCHDO system
33RO200306_01 processing - BTL/merge - CH3CL, CH3BR, CH3I
2023-09-08
C Berys
Submissions
id submit date submitted by file name
---- ------------- ----------------- ----------------
7882 2008-07-14 Yvon Lewis, Shari A16N_MeX_HY1.csv
Changes
* Changed 'CH3Cl' to 'CH3CL'
* Changed 'CH3Br' to 'CH3BR'
* Flag column added with 2 flags for new parameters CH3CL, CH3BR, CH3I, missing values flagged 5
* Station 108, Cast 1, Bottle 4, at pressure 2750, changed to Bottle 7
to reflect matching pressure in the original file (2750.6)
* Station 108, Cast 1, Bottle 3, at pressure 3750, changed to Bottle 5
to reflect matching pressure in the original file (3748.5)
NOTE: Changes repeated from HCFC data
* Station 124, Cast 2, Bottle 1 changed to Cast 1
Merges
* A16N_MeX_HY1.csv (7882) merged into 33RO200306_01_hy1.csv (19364) using hydro 0.8.2-61-g3353cfe
- merged parameters: CH3Cl, CH3Cl_FLAG_W, CH3Br, CH3Br_FLAG_W, CH3I, CH3I_FLAG_W
33RO200306_01_hy1.csv and 33RO200306_01_nc_hyd.zip opened in JOA with no apparent problems.
Conversions
file converted from software
------------------------ --------------------- -----------------------
33RO200306_01_nc_hyd.zip 33RO200306_01_hy1.csv hydro 0.8.2-61-g3353cfe
Updated Files Manifest
file stamp
------------------------ -----------------
33RO200306_01_hy1.csv 20230908CCHSIOCBG
33RO200306_01_nc_hyd.zip 20230908CCHSIOCBG
CCHDO-1.0 CF netCDF files converted from bottle exchange file
CCHDO-1.0 CF netCDF files converted from ctd exchange file
File created in the CCHDO system
A16N 2003 33RO200306_01 processing - BTL/merge - TRITUM, HELIUM, DELHE3, NEON
2021-05-27
C Berys
Submissions
id date submit by file name
----- ---------- ------------------- --------------------------------------
11672 2015-04-15 Robert Key 33RO20030604.exc.csv
3026 2015-04-13 Robert Newton LDEO_NGL_CliVarTritium4CCHDO_A16N.xlsx
4800 2015-04-11 Robert Newton LDEO_NGL_CliVarHeNe4CCHDO_A16N.xlsx
4489 2008-08-06 Gardner, Wilford D. a16n1POC_submission-_149944.xls
7622 a16n_2003ahy_rplcd_20121016_hy.txt
Changes
* Station 122, Cast 2,Sample 32 - NEON, NEONER, NEON_FLAG_W changed to fill value (-999) and flag 9
* Station 15, Cast 1, Sample 6 - DELHE3_FLAG_W flag missing, filled in with 2
* Flag changed from 2 to 9 for fill value (-999) for TDN, HCFC-22, HCFC-141b
* Flag changed from 4 to 5 for fill value (-999) for CFC113
* Flag changed from 3 to 5 for fill value (-999) for TDN
Notes
* A16N_MeX_HY1.csv submitted on 2008-07-14 not merged due to duplicate unique sample identifier (Station, Cast, Sample)
* STNNBR_U added for convenience, duplicate of station numbers without leading zeros
* unresolved flags for SILCAT, NITRIT, PHSPHT, NEON
Merges
* 33RO200306_01.exc.csv (1672) merged into 33RO200306_01_hy1.csv (11610) using hydro 0.8.2-61-g3353cfe
- Merged parameters: TRITUM, TRITER, TRITUM_FLAG_W
* LDEO_NGL_CliVarHeNe4CCHDO_A16N.xlsx (4800) merged into 33RO200306_01_hy1.csv (11610) using hydro 0.8.2-61-g3353cfe
- Merged parameters: HELIUM, HELIER, HELIUM_FLAG_W, DELHE3, DELHER, DELHE3_FLAG_W, NEON, NEONER, NEON_FLAG_W
33RO200306_01_hy1.csv and 33RO200306_01_nc_hyd.zip opened in JOA with no apparent problems.
Conversions
file converted from software
------------------------ --------------------- -----------------------
33RO200306_01_nc_hyd.zip 33RO200306_01_hy1.csv hydro 0.8.2-61-g3353cfe
33RO200306_01hy.txt 33RO200306_01_hy1.csv hydro 0.8.2-61-g3353cfe
Updated Files Manifest
file stamp
------------------------ -----------------
33RO200306_01_hy1.csv 20210527CCHSIOCBG
33RO200306_01_nc_hyd.zip 20210527CCHSIOCBG
33RO200306_01hy.txt
File created in the CCHDO system
File created in the CCHDO system
A16N 2003 33RO200306_01 processing - merge CTDBEAMCP
2020-02-14
CCHDO
Submission
filename submitted by date id
------------- ------------ ---------- -----
2003_A16N.txt Wilf Gardner 2019-12-13 14750
Changes
-------
2003_A16N.txt
- renamed Exchange file names to current format.
- removed last incorrect comma from Parameter and Unit lines
- renamed header SECT to SECT_ID
- merged CTDBEAMCP data from Wilf Gardner into existing Exchange file.
- replaced CTDBEAMCP missing data -88.0000 with Exchange -999.0000 and assigned flags=9.
- added comments.
Conversion
----------
file converted from software
----------------------- -------------------- -----------------
33RO200306_01_nc_ctd.zip 33RO200306_01_ct1.zip 0.8.2-57-g8aa7d7a
Updated Files Manifest
----------------------
file stamp
--------------------- ----------------
33RO200306_01_ct1.zip 20200214CCHSIO
33RO200306_01_nc_ctd.zip 20200214CCHSIO
:Removed parameters: none
:Updated parameters: none
:Merged parameters: CTDBEAMCP, CTDBEAMCP_FLAG_W
opened in JOA with no apparent problems:
33RO200306_01_ct1.zip
33RO200306_01_nc_ctd.zip
opened in ODV with no apparent problems:
33RO200306_01_ct1.zip
final BEAMCP data
File was created on or before this date
File was created on or before this date
File was created on or before this date
File was created on or before this date
File was created on or before this date
File was created on or before this date
The following data are now available As Received, unprocessed by the CCHDO.
http://cchdo.ucsd.edu/cruise/33RO200306_01
33RO20030604.exc.csv
Expocode: 33RO20030604 Ship: None Woce Line: A16N Note: version with the Schlosser H3,He,He3,Neon merged
Expocode: 33RO200306_01 Ship: None Woce Line: A16N Note: Tritium measurements from the A16N repeat hydro cruise.
The following data are now available As Received, unprocessed by the CCHDO.
http://cchdo.ucsd.edu/cruise/33RO200306_01
LDEO_NGL_CliVarHeNe4CCHDO_A16N.xlsx
The following data are now available As Received, unprocessed by the CCHDO.
http://cchdo.ucsd.edu/cruise/33RO200306_01
LDEO_NGL_CliVarTritium4CCHDO_A16N.xlsx
Expocode: 33RO200306_01 Ship: None Woce Line: A16N Note: This file has HELIUM, DELHE3 and NEON data.
==============================
33RO200306_01 processing - BTL
==============================
2013-12-29
R Lee
.. contents:: :depth: 2
Process
=======
Changes
-------
- Added hash pipe to demark data citation
.. _merge:
Merge
-----
Conversion
----------
===================== ================== =======================
file converted from software
===================== ================== =======================
a16n_2003a_nc_hyd.zip a16n_2003a_hy1.csv hydro 0.8.0-78-g3e6ecac
===================== ================== =======================
All converted files opened in JOA with no apparent problems.
Directories
===========
:working directory:
/data/co2clivar/atlantic/a16/a16n_2003a/original/2013.12.29_citation_RJL
:cruise directory:
/data/co2clivar/atlantic/a16/a16n_2003a
Updated Files Manifest
======================
- a16n_2003a_nc_hyd.zip
- a16n_2003a_hy1.csv
HCFC
Previous version WOCE bottle file
2012-10-16
A16N 2003 ExpoCode 33RO200306_01 merge notes - HCFC
C Berys
SUBMISSION
A16N_HCFC_HY1.csv submitted by Shari Yvon Lewis on 2008-07-14
containing HCFC data merged into online file using
merge_exchange_bot.rb (J Fields)
The following parameters were added (* with flag):
HCFC-22*
HCFC-142b*
HCFC-141b*
The following changes were made to the submission file:
DEPTH units changed from "" to "METERS"
HCFC141b changed to HCFC-141b
HCFC142b changed to HCFC-142b
Flag column added with 2 flags for new parameters
Station 108, Cast 1, Bottle 4, at pressure 2750, changed to Bottle 7
to reflect matching pressure in the original file (2750.6)
Station 108, Cast 1, Bottle 3, at pressure 3750, changed to Bottle 5
to reflect matching pressure in the original file (3748.5)
NOTE: PI contacted to confirm changes
Station 124, Cast 2, Bottle 1 changed to Cast 1
ORIGINAL
The following changes were made to the original Exchange Bottle file:
None
NOTE: PON has units 'UMOL/L' which do not match the expected 'UG/KG'
MERGED FILE
All comment lines from original file copied back in following merge
NetCDF bottle file created using exbot_to_netcdf.pl (S Diggs)
WOCE bottle file not created, format does not allow for parameter
names exceeding 8 characters
Previous version available under Updates
Exchange and NetCDF files opened in JOA with no apparent problems
working directory
/data/co2clivar/atlantic/a16/a16n_2003a/original/2012.09.19_hcfc_cberys/
PARAMETER/PROGRAM NAME EMAIL ADDRESS
----------------- ---- --------------
Chief Scientist John Bullister-PMEL <mailto:bullister@pmel.noaa.gov>bullister@pmel.noaa.gov
CTDO/S/O2/nutrients Greg Johnson-PMEL <mailto:gjohnson@pmel.noaa.gov>gjohnson@pmel.noaa.gov
Nutrients Calvin Mordy-PMEL <mailto:mordy@pmel.noaa.gov>mordy@pmel.noaa.gov
Jia-Zhong Zhang-AOML <mailto:zhang@aoml.noaa.gov>zhang@aoml.noaa.gov
Total CO2(DIC), pCO2 Dick Feely- PMEL <mailto:feely@pmel.noaa.gov>feely@pmel.noaa.gov
Rik Wanninkhof-AOML <mailto:rik.wanninkhof@noaa.gov>rik.wanninkhof@noaa.gov
CFC John Bullister-PMEL <mailto:bullister@pmel.noaa.gov>bullister@pmel.noaa.gov
CFC Mark Warner-UW <mailto:mwarner@ocean.washington.edu>mwarner@ocean.washington.edu
He/Tr Peter Schlosser <mailto:peters@ldeo.columbia.edu>peters@ldeo.columbia.edu
14C/13C Ann McNichol WHOI <mailto:amcnichol@whoi.edu>amcnichol@whoi.edu
Total Alkalinity, pH Frank Millero -RSMAS <mailto:fmillero@rsmas.miami.edu>fmillero@rsmas.miami.edu
DOC/TDN Dennis Hansell-RSMAS <mailto:dhansell@rsmas.miami.edu>dhansell@rsmas.miami.edu
POC/PON Wilf Gardner-TAMU <mailto:wgardner@ocean.tamu.edu>wgardner@ocean.tamu.edu
CDOM Norm Nelson-UCSB <mailto:norm@icess.ucsb.edu>norm@icess.ucsb.edu
HCFCs Shari Yvon-Lewis-AOML <mailto:syvon@aoml.noaa.gov>syvon@aoml.noaa.gov
Following American Geophysical Union recommendations, the data should be cited as: "data provider(s), cruise name or cruise ID, data file name(s), CLIVAR and Carbon Hydrographic Data Office, La Jolla, CA, USA, and data file date." For further information, please contact one of the parties listed above or <mailto:cchdo@ucsd.edu>cchdo@ucsd.edu. Users are also requested to acknowledge the NSF/NOAA-funded U.S. Repeat Hydrography Program in publications resulting from their use.
I just added new pdf and text versions of an expanded cruise report to the co2clivar/atlantic/a16/a16n_2003a/ directory. The new docs include:
- New CFC report
- New Summary/Introduction
- New sections on Dissolved Organic Carbon, 14C & Helium/Tritium
- Expanded Nutrients report
- expanded data processing notes
Since they replaced earlier docs in this directory they are already online.
Previous docs were renamed and moved to the original directory.
CDOM
2011-11-22
A16N 2003 ExpoCode 33RO200306_01 merge notes - CDOM
C Berys
SUBMISSION
a16ncdom_final.txt submitted by Norm Nelson on 2005-04-20, resubmitted
by email from Susan Piercy on behalf of Norm Nelson on 2010-09-21,
containing CDOM data merged into online file using
merge_exchange_bot.rb (J Fields)
The following parameters were added:
CDOM325
CDOM325_FLAG_W
CDOM340
CDOM340_FLAG_W
CDOM380
CDOM380_FLAG_W
CDOM412
CDOM412_FLAG_W
CDOMSL
CDOMSL_FLAG_W
CDOMSN
CDOMSN_FLAG_W
The following changes were made to the submission file:
added parameter mnemonics and units
added cast 1 to all stations in accordance with sum file
changed bottle numbers to 3 digits with leading zeros
ORIGINAL
The following changes were made to the original Exchange Bottle file:
DEPTH units changed from "" to "METERS"
CTDRAW units changed from "" to "DBAR"
NOTE: PON and PON have units "UMOL/L" which do not match the expected "UG/KG"
MERGED FILE
All comment lines from original file copied back in following merge
NetCDF bottle file created using exbot_to_netcdf.pl (S Diggs)
WOCE bottle file created using exchange_to_wocebot.rb (J Fields)
Exchange and NetCDF files opened in JOA with no apparent problems
Working directory:
/data/co2clivar/atlantic/a16/a16n_2003a/original/2011.11.21_cdom_cberys/
PH/PH_TMP/PH_FLAG/FCO2_TMP/TDN
2011-08-24
A16N 2003 ExpoCode 33RO200306_01
WOCE to Exchange conversion notes
C Berys
Converted WOCE bottle file to Exchange using hyd_to_exchange.rb (J Fields)
The following changes were made to the WOCE bottle file:
FCO_TMP changed to FCO2TMP
FCO2TMP units changed from 'ITS-90' to 'DEG C'
PH_TMP units changed from 'ITS-90' to 'DEG C'
NOTE: Units for PON and POC are 'UMOL/L' which does not match the
value in the parameter descriptions table 'UG/KG'.
All comment lines from original file copied back into new file following merge
NetCDF bottle file created using exbot_to_netcdf.pl (S Diggs), files zipped
NetCDF and Exchange files opened in JOA with no apparent problems
Working directory:
/data/co2clivar/atlantic/a16/a16n_2003a/original/20110823_carbon_cberys
PH, PH_TMP, PH_FLAG, FCO2_TMP, and TDN. Parameters are in WOCE bottle file but not in Exchange bottle file.
Expocode: 33RO200306_01 Ship: RONALD H. BROWN Woce Line: A16n Note: These data were missing from online Exchange bottle file but in WOCE bottle file. Submitting and placing in queue for follow up. Hi Steve, I've just discovered that the CCHDO Exchange file for the a16n_2003a cruise 33RO200306, does not have PH, PH_TMP, PH_FLAG, FCO2_TMP, and TDN data. I've send the final carbon data file with all these data to CCHDO on 10.05.2007, according to my notes. Attached is the final a16n_2003a_final_Carbon.csv data file for your use. Please merge the data into CCHDO Exchange file. Thank you, Alex.
I've just discovered that the CCHDO Exchange file for the a16n_2003a cruise
33RO200306, does not have PH, PH_TMP, PH_FLAG, FCO2_TMP, and TDN data. I've
send the final carbon data file with all these data to CCHDO on 10.05.2007,
according to my notes. Attached is the final a16n_2003a_final_Carbon.csv data
file for your use. Please merge the data into CCHDO Exchange file.
CDOM data
Expocode: 33RO200306_01 Ship: RONALD H. BROWN Woce Line: A16N Note: CDOM data submitted by Norm Nelson on 2005-04-20, resubmitted by email from Susan Piercy on behalf of Norm Nelson on 2010-09-21.
Details: File a16ncdom_final.txt containing CDOM data submitted by Norm Nelson on 2005-04-20, resubmitted by email from Susan Piercy on behalf of Norm Nelson on 2010-09-21, available under 'as received', unprocessed by CCHDO.
Action: Merge Data
Notes: CDOM data submitted by Norm Nelson on 2005-04-20, resubmitted by email from Susan Piercy on behalf of Norm Nelson on 2010-09-21.
a16n1POC_submission-_149944.xls submitted by Danie Kincadeon
behalf of Wilf Gardner on 2008-08-06 available under
'Preliminary/Unprocessed', unprocessed by CCHDO. POC/PON data not
merged in Exchange file, these data are merged in WOCE format file.
A16N_MeX_HY1.csv submitted by Shari Yvon Lewis on 2008-07-14
available under 'Preliminary/Unprocessed', unprocessed by CCHDO.
These data supercede the previous submission's iron and aluminum data, while adding manganese. These are the shorebased corrected values of the shipboard generated trace elements Fe and Al. They are in tab delimited text the output from an ODV file containing location, station, bottle cast information etc. Quality flags are assigned using the ODV mapping 0= good, 1=unknown, 4= questionable, 8= bad
Expocode: 33RO200306_01 Ship: RONALD H. BROWN Woce Line: A-16N Note: a) Name: Chris Measures Institution: University of Hawaii Country: USA Email address: chrism@soest.hawaii.edu b)the data are public c)parameter names and units Station number Cast number + bottle number Aluminum (unit: nM) Flag Iron (unit: nM) Flag Manganese (unit: nM) Flag
the data are public
parameter names and units
Station number
Cast number + bottle number
Aluminum (unit: nM)
Flag
Iron (unit: nM)
Flag
Manganese (unit: nM)
Flag
Status: public
Action: Updated Parameters
Notes: These are the shorebased corrected values of the shipboard generated trace elements Fe and Al. They are in tab delimited text the output from an ODV file containing location, station, bottle cast information etc. Quality flags are assigned using the ODV mapping 0= good, 1=unknown, 4= questionable, 8= bad
A16N POC/PON data - not merged in Exchange file
Expocode: 33RO200306_01 Ship: BROWN Woce Line: A16n Note: This file is a re-submission of the A16n_2003 POC/PON values with corrected station/cast/samples for values previously unmergeable. File was emailed by Wilf Gardner submitted via web by DBK
Attached are two files - a revision of the file you sent and the file we sent in with the data for the bottles. In your revised file we have indicated what to do with each file. As you suspected, many of them should have been posted as cast 2. Most of the others are in-line samples (inflow) or bucket samples for which you don't have any other data. They were taken on station as indicated by the same lat-lon as the stations with which they were associated. You can add these or ignore them as you wish. The stations in question are highlighted in yellow or by a different font color in the other attached file.
A16N HCFC bottle file
Expocode: 33RO200306_01 Ship: Ron Brown Woce Line: A16N Note: None
A16N CH3 data
Expocode: 33RO200306_01 Ship: Ron Brown Woce Line: A16N Note: None
2008.07.09 DBK
Merging notes for C14/13 into a16n_2003a bottle file.
file submitted by Bob Key on 2008.06.26 called A16N.2003.CIsotopes.csv
contains:
DELC14,C14ERR,DELC13 and associated errors
All parameters merged with no apparent errors. Checked the
format of the file using woccvt. No errors were reported.
Bottle file still needs PON/POC data merged.
2008.07.08 DBK
Merge notes for merging Alex Kozyr's final carbon data
into the a16_2003a bottle file.
Data submitted by Alex on 10.05.2007. File named a16n_2003a_final_Carbon.csv
contained the following parameters:
FCO2,FCO2_TMP,PH_SWS_25C,PH_TMP,TALK,TALK_FLAG_W,TCO2,DOC,TDN
and their associated quality flags.
Instructions as per Alex's web submission entry were:
Notes:Please, replace all carbon-related parameters with these ones in
the attached file. Note that PCO2 was replaced with FCO2 and extra
column for FCO2_TMP, also PH was replaced with PH_SWS (pH on the sea
water scale) with extra column for PH_TMP. Please, let me know when
the data in this file will be merged with the master file at CCHDO.
Thank you,
Alex.
MERGE NOTES:
Original file was .csv and had to be converted to fixed width in order
to use merge software mrgsea.
mrgsea did not accept FCO2_TMP as an integer for merging. This parameter
was edited to a floating point number with precision of 1 (f8.1).
PH_SWS missing values of -999.0000 are larger than the woce format allows
and were edited to -9.0000.
All parameters merged without problems or errors. Ran wocecvt with no
errors, however some parameters were unrecognized.
Notes on Completed WOCE Bottle file:
Created exchange file with no apparent errors. File
named a16n_2003a_hy1.csv
Following parameters were not recognized nor included in the exchange file:
FCO_TMP
PH_SWS
PH_SWS_FLAG_W
PH_TMP
POC
POC_FLAG_W
PON
PON_FLAG_W
TDN
TDN_FLAG_W
The exchange conversion code changed FCO2 to PCO2 during conversion.
This was edited back in file.
Checked file with JOA, which also calls FCO2 by another parameter name,
however this appears to be a JOA bug and FCO2 values appear accurate.
Created netcdf files with no apparent errors. Zipped file
is named a16n_2003a_nc_hyd.zip
Please, replace all carbon-related parameters with these. Note that PCO2 was replaced with FCO2 and extra column for FCO2_TMP, also PH was replaced with PH_SWS (pH on the sea water scale) with extra column for PH_TMP.
Type: Status: public
Name: Kozyr, Alex
Institute: CDIAC/ORNL
Country: USA
Expo:33RO200306_01 Line: A16N_2003a
Date: 2003-06-04
Action:Merge Data, Place Online, Updated Parameters
Notes:Please, replace all carbon-related parameters with these ones in
the attached file. Note that PCO2 was replaced with FCO2 and extra
column for FCO2_TMP, also PH was replaced with PH_SWS (pH on the sea
water scale) with extra column for PH_TMP. Please, let me know when
the data in this file will be merged with the master file at CCHDO.
pH data for A16N_2003 have major problems
and will be revised. I am going to put a note on a web that nobody should use
pH numbers at this time. Could you do the same, please? I will send you new
numbers as soon as I get the new file from Frank Millero.
File: a16n1POC_submission-redo2.xls Type: Excel Status: Public
Name: Gardner, Wilford D
Institute: Texas A&M University
Country: USA
Expo:33RO2003_01 Line: A16N
Date: 06/2003
Action:Merge Data,Place Data Online
Notes:
These are POC and PON bottle data
Upload directory: /incoming_data/20070307.070610_A16N_Gardner,_Wilford_D
Here are the latest update on the Carbon Data status at CCHDO and CDIAC.
A16N_2003:
TCO2 - OK;
TALK - OK;
pCO2 - OK;
pH - OK;
DOC, DTN - data were not merged in CCHDO exchange file.
Sept. 6, 2006
Merged the final DOC and TDN data submitted by Alex Kozyr (see B.Key 8/26/05 email) into the online file. No apparent problems.
Was not able to make the exchange file. Program needs to be modified to accept DOC and TDN.
I submitted the DOC data from P02_2004 and A16N_2005 using CCHDO submission page. I received the A20 and A22 DOC data files from you, so I guess you have these files, but I did not see the DOC numbers for these cruises were merged at CCHDO yet.
Here are attached 3 files for DOC data from P02_2004, A16N_2003, and A16S_2005 cruises. Please, let me know if you received these files OK and when are you planning to merge these data.
Thanks for sending the file. I read through it and it looks OK.
All I can do is work forward on this. A16N and A16S data will be completed together, after Ocean Sciences. The raw data are on line at SIO.
Hello John,I just wanted to let you know that we received the meteorological data from your A16N cruise from the Ronald Brown's marine tech (through an agreement where we get all data from the Brown). The data underwent quality control at FSU and are available as part of a larger set of Ron Brown meteorology data at: http://www.coaps.fsu.edu/RVSMDC/cgi-bin/nonwoce-ship.cgi?id=WTEC
I am working on merging, updating the a16n_2003a line using the files the Bullister sent yesterday.
I am responsible for the data and it's final workup. There were significant data dropouts in records during A16N. FYI, results from A16S should be available about the same time as those for A16N. I estimate completion to be approximately January 2006. We had two sucessive years when funding did not appear as expected (this year a 4 month gap) and all NOAA related work had to stop.
New cruise report contains John Bullister's crise summary, OXY and CFC reports, Mordy's nutrients report, K. Mctaggart's CTD report, and NOAA/PMEL CO2 report; as well as CCHDO data processing notes.
Here is a more informative version of the A16N cruise report for nutrients.
Please, notice that all CTD dissolved oxygen values for 33RO200306, STNNBR 018, CASTNO 1, are equal to 0.0 (Zero) and have a Quality Flag equal to 2 (Two).
Station 18 oxygens were all 0.0, but the Q flag was 2. I changed the flags to 9 for all oxygens. Made new zip file with corrected sta. 18, and made a new exchange file. I was unable to make a netcdf file at this time.
I was the Chief Scientist on the repeat hydrography cruise A16N2003 (Cruise ExpoCode 33RO200306_01).
I did a quick check to compare the shipboard data file from A16N2003 to the files currently at the web site:
http://whpo.ucsd.edu/data/co2clivar/atlantic/a16/a16n_2003a/index.htm
I think the bottle hydro values (ctdprs, ctdtmp, ctdsal, salnty, ctdoxy, fctdsal, fsalnty, fctdoxy), dissolved oxygen, nutrients, and CFCs have not been updated from the shipboard versions.
Last year I asked the individual PI's to send their updated A16N2003 data to the CCHDO office directly, as per Jim Swift's instructions. I also sent copies I had of the updated hydro, oxygen, nutrient and CFC data to the office some time ago.
I think it is important to get the updated versions of the data merged into your web site files. The 'submit data' feature at http://whpo.ucsd.edu/ does not seem to be working at present. In the next message I will attach the following files:
a16n_allo.flg
(revised bottle file of ctdprs, ctdtmp, ctdsal, salnty, ctdoxy, fctdsal, fsalnty, fctdoxy data, prepared by Kristy McTaggart at PMEL)
A16NBottleOxygenFinal_may21_2004.xls
(Excel spreadsheet of revised oxygen data, from Jia-Zhong Zhang at AOML; data are in per liter units)
A16NBottleOxygenFinal_may21_2004working.txt.senttoWOCE*
(ASCII version of oxygen data I extracted from above Excel spreadsheet. I changed 5 oxygen flags in this file; data are in per liter units).
A16nuts-apr14.xls
(Excel spreadsheet of revised nutrient data from Calvin Mordy at PMEL; data are in per liter units)
A16nuts-apr14working.txt
(ASCII version of revised nutrient data I extracted from above spreadsheet; data are in per liter units)
a16n2003_cfc.dat
(ASCII listing of revised CFC data from John Bullister; data are in per kg units)
flagchanges
(a file describing the flag changes I applied to the master bottle data file I keep here at PMEL. These mostly change the parameter flags for samples where the fbtlnbr is 3, 4 or 9)
I would be extremely grateful if you could let me know that you have received these files, if you have any questions or comments on the files, and when the data have been merged into the web site version of the A16N2003 data set.
I tried to submit some files to CCHDO through your web site, but it would not work, it would ask me to complete the form, but form was completely completed :-) and I did not know what it wanted from me. So, the attached file is the final and public DOC and TDN data measured during the A16N_2003a cruise (33RO200306_01_02). Could you please merge these data and their quality flags into the main hydrographic files. Please, let me know when the updated files will be available online.
June 21, 2005
a16n_2003a 33RO200306_01 and 33RO200306_02
Merged the DOC (dissolved organic carbon) and
TDN (total dissolved nitrogen) submitted by Dennis
Hansell on Oct. 27, 2004.
Many values of -9.00 had flags of 2 or 3, I
changed the flags for values of -9.00 to 9.
There was one level that was not in the online
file and therefore was not merged, see below.
STNNBR CASTNO SAMPNO BTLNBR DOC DOCF TDN TDNF
umol/kg umol/kg
150 1 1 1 39.51 2 33.66 2
Made new exchange and netcdf files.
Sarilee Anderson
Please, notice that all CTD dissolved oxygen values for 33RO200306, STNNBR 018, CASTNO 1, are equal to 0.0 (Zero) and have a Quality Flag equal to 2 (Two).
The file: a16cdom_final.txt - 9054 bytes
has been saved as: 20050420.170714_NELSON_A16N_a16cdom_final.txt
in the directory: 20050420.170714_NELSON_A16N
The data disposition is:
Public
The file format is:
Plain Text (ASCII)
The archive type is:
NONE - Individual File
The data type(s) is:
Other: Bottle Data (other)
The file contains these water sample identifiers:
Cast Number (CASTNO)
Station Number (STATNO)
Bottle Number (BTLNBR)
Sample Number (SAMPNO)
NELSON, NORM would like the following action(s) taken on the data:
Place Data Online
Attached is the CTD documentation file I gave to John Bullister along with the CTD bottle data last November. He said it was incorporated into a document with oxygens and nutrients etc. and submitted to WHPO. Please let me know if you need anything else.
The attached .doc file is the table for CLIVAR Repeat Section data status summary. As you can see from the table, we have opened the data from A22_2003, A16N_2003, and P17N_2001 for public through CDIAC CLIVAR web page:
http://cdiac.ornl.gov/oceans/RepeatSections/repeat_map.html
and these data are also available through Ocean Data Mercury:
http://mercury.ornl.gov/ocean/
Jan. 18, 2005
a16n_2003a 33RO200306_01
Merged the carbon data (TCO2, TALK, PH, and PCO2) sent by A. Kozyr Dec. 10, 2004 re his email below into online file. Made new exchange and netcdf files.
Date: Fri, 14 Jan 2005 14:18:05 -0500
From: Alexander Kozyr <kozyra@ornl.gov>
Subject: Re: A22_2003 Alkalinity data
To: Sarilee Anderson <sarilee@minerva.ucsd.edu>
Thank you very much Sarilee. Did you make a new exchange file as well?
Could you check A16N_2003a files? I've sent the final carbon-related data (TCARBN (or TCO2), ALKALI, pH, and pCO2) for this section on 12/10/2004 to WHPO but did not see any changes in your files. When you merge these data, please make sure that you merge all four parameters, because from the first look it seems like TCARBN and pH are the same, but in reality we PIs changed some numbers and flags for both.
The cruise we did was A16N_2003 (not p16n_2003).
I forwarded Jim Swift's directive (see next message) to all the investigators on A16N_2003 last February, advising them to forward data and documentation directly to the CCHDO-WHPO. I'll send out another reminder.
In addition to the carbon data and documentation, I have copies here of the revised CTD and bottle salinity data from Kristy McTaggart, revised CFC data from our group, revised oxygen data (and documentation) from Z.Zhang, and revised nutrient data from Calvin Mordy. I can send you these individual files as attachments to the next message.
I have merged all of these revised data files into Frank Delahoyde's A16n2003 shipboard file to create a master data file in the .sea format. I can also sent this to you.
Unfortunately, I am heading out tomorrow for the A16S cruise and can't do much more before I leave. I will have all the a16n2003 data with me on the cruise and should be able to answer questions by e-mail.
My address should be:
john.bullister.atsea@rbnems.ronbrown.omao.noaa.gov
Date: Wed, 29 Dec 2004 13:44:00 -0800 (PST)
From: WHPO Website <http@odf.ucsd.edu>
To: Calvin.W.Mordy@noaa.gov, jrweir@odf.ucsd.edu, whpo@ucsd.edu
Subject: WHPO DATA A16N: BOT from MORDY
X-MailScanner: PASSED (v1.2.8 53031 iBTLi3s7071401 mailbox9.ucsd.edu)
X-MailScanner: PASSED (v1.2.8 53031 iBTLi9LA071458 mailbox9.ucsd.edu)
This is information regarding line: A16N
ExpoCode:
Cruise Date: 2003/06/04 - 2003/08/11
From: MORDY, CALVIN
Email address: Calvin.W.Mordy@noaa.gov
Institution: NOAA/PMEL
Country: USA
The file: A16N-Apr14nuts-submitted.xls - 1207296 bytes
has been saved as: 20041229.134359_MORDY_A16N_A16N-Apr14nuts-submitted.xls
in the directory: 20041229.134359_MORDY_A16N
The data disposition is:
Public
The bottle file has the following parameters:
SILCAT, NITRAT, NITRIT, PHSPHT
The file format is:
MS Excel (Binary)
The archive type is:
NONE - Individual File
The data type(s) is:
Bottle Data (hyd)
The file contains these water sample identifiers:
Cast Number (CASTNO)
Station Number (STATNO)
Bottle Number (BTLNBR)
MORDY, CALVIN would like the following action(s) taken on the data:
Merge Data
Place Data Online
Update Parameters
Any additional notes are:
Data are provided in umole/l and umole/kg. The lab temperature and the CTD bottle salts that were used in the unit conversion are also provided.
Copied files submitted by A. Kozyr from INCOMING to
.../a16n_2003a/original_data/20041210_KOZYR_A16N_2003.
These files contain updated TCARBN, TALK, PCO2, and PH.
I will merge into online file.
I have just submitted the final TCARBN, TALK, pH, and pCO2 data for A16_2003 cruise for merging into the hydrographic data file. Could you please notify me as soon as you done a merging and produce an exchange format with the new numbers. Please, let me know if you have any questions regarding the data.
The file: a16n_2003_carbn_final.txt - 308958 bytes has been saved as:
20041210.063700_KOZYR_A16N_2003_a16n_2003_carbn_final.txt
in the directory:
20041210.063700_KOZYR_A16N_2003
The data disposition is:
Public
The bottle file has the following parameters:
TCARBN, TALK, PCO2, PH
The file format is:
WOCE Format (ASCII)
The archive type is:
NONE - Individual File
The data type(s) is:
Bottle Data (hyd)
The file contains these water sample identifiers:
Cast Number (CASTNO)
Station Number (STATNO)
Bottle Number (BTLNBR)
Sample Number (SAMPNO)
KOZYR, ALEX would like the following action(s) taken on the data:
Merge Data
Any additional notes are:
This is the final bottle TCARBN, TALK, pH, and pCO2 data. I have merged these numbers from two different files I received from PMEL and AOML CO2 measurement groups. New quality flags were assigned according to QA-QC work. Please let me know if you need more information on these dat
I am attaching here 3 files with reports on measured carbon fields. You will have to decide what and how much information you need for cruise report.
A16N:
I've just received the final TCO2, TALK, pH, and pCO2 data from Rik Wanninkhof and Frank Millero for A16N section. I am planning to merge the data into WHPO format and do the QA-QC during next month or so. I will send the final QCed data and new flags to CCHDO as soon as I finish.
The data disposition is: Public
The file format is: Plain Text (ASCII)
The archive type is: NONE - Individual File
The data type(s) is: Bottle Data (hyd)
Dissolved Organic Carbon and Total Dissolved Nitrogen for A16N2003 Line and Documentation
The file contains these water sample identifiers:
Cast Number (CASTNO)
Station Number (STATNO)
Bottle†Number (BTLNBR)
Sample Number (SAMPNO)
HANSELL, DENNIS would like the following action(s) taken on the data: Merge Data
Place Data Online
A transmission error occurred from PMEL to SIO, resulting in only 80 files being at the WHPO. Alison MacDonlad from WHOI noticed the problem. I re-ftp'd the files, format checked them, convert them to Exchange, and put all of the ftp files back on the website. All checks out.
The following are new cruise reports that need to go on the web. We'll work
on them next week.
Corrected all cruise line identifiers to A16N (from A16N_2003A) as per Jim Swift's request.
New PDF and text docs online.
a16n_2003_33RO200306_01.pdf
a16n_2003_33RO200306_01.txt
are in the newdocs direcory. please replace the current online docs with these new docs.
Updated all citations (00_README files) embedded in each zip archive as well as the Exchange formatted bottle file. Bottle Exchange updated to reflect accurate EXPOcodes for each station from updated summary file.
# These data were provided by:
#
# PARAMETER/PROGRAM NAME EMAIL ADDRESS
# ----------------- ---- --------------
# Chief Scientist John Bullister-PMEL bullister@pmel.noaa.gov
# CTDO/S/O2/nutrients Greg Johnson-PMEL gjohnson@pmel.noaa.gov
# Nutrients Calvin Mordy-PMEL mordy@pmel.noaa.gov
# Jia-Zhong Zhang-AOML zhang@aoml.noaa.gov
# Total CO2(DIC) Dick Feely- PMEL feely@pmel.noaa.gov
# ,pCO2
# Rik Wanninkhof-AOML rik.wanninkhof@noaa.gov
# CFC John Bullister-PMEL bullister@pmel.noaa.gov
# CFC Mark Warner-UW mwarner@ocean.washington.edu
# HCFs Shari Yvon-Lewis-AOML syvon@aoml.noaa.gov
# He/Tr Peter Schlosser peters@ldeo.columbia.edu
# 14C/13C Ann McNichol WHOI amcnichol@whoi.edu
#
#
# The data included in these files are preliminary, and are
# subject to final calibration and processing. They have been
# made available for public access as soon as possible following
# their collection. Users should maintain caution in their
# interpretation and use. Following American Geophysical Union
# recommendations, the data should be cited as: "data
# provider(s), cruise name or cruise ID, data file name(s),
# CLIVAR and Carbon Hydrographic Data Office, La Jolla, CA,
# USA, and data file date." For further information, please
# contact one of the parties listed above or whpo@ucsd.edu.
# Users are also requested to acknowledge the NSF/NOAA-funded
# U.S. Repeat Hydrography Program in publications resulting
# from their use.
Repackaged all zip files (WOCE CTD, Exchange CTD, and WOCE Bottle w/ SUM) with new citation files per request from Talley and Swift).
CTD, SUM, BTL available along with Exchange formatted versions on WHPO website.
For A16N please keep me (Gregory Johnson) as PI for CTD/O2 and S, but Mordy & Zhang for nutrients, and Zhang for bottle O2.
I have obtained the updated CTD files from PMEL's anonymous ftp site and will get them processed and up on the website by tomorrow afternoon. Thanks for correcting the calibration and making the files available in such a timely manner.
Steve, There is a file for you on our anonymous FTP site, ftp.pmel.noaa.gov, under /ctd/woce/a16n. It's called a16n_allo.clb and it is the preliminary calibrated discrete CTD measurements and associated sample salinities and oxygens. In generating this file, I found an error I had made in applying the preliminary calibrations to the profile data. The .ctd files now on our FTP site are correct and should be downloaded again. I apologize for this oversight. And I changed the expocode in the header to be a 13-character string instead of a 12-character string as it is on the WHPO website (e.g. suffix '_01' instead of '_1').
BTL Parameters Submitted: BTLNBR CTDRAW CTDPRS CTDTMP CTDSAL CTDOXY THETA SALNTY OXYGEN SILCAT NITRAT NITRIT PHSPHT CFC-11 CFC-12 CFC113 TCO2 TALK PH PCO2
These data were provided by:
PARAMETER/PROGRAM NAME EMAIL ADDRESS
---------------------- ------ ---------------
Chief Scientist John Bullister-PMEL bullister@pmel.noaa.gov
CTDO/S/O2/nutrients Greg Johnson-PMEL gjohnson@pmel.noaa.gov
Nutrients Calvin Mordy-PMEL mordy@pmel.noaa.gov
Jia-Zhong Zhang-AOML zhang@aoml.noaa.gov
Total CO2(DIC), pCO2 Dick Feely- PMEL feely@pmel.noaa.gov
Rik Wanninkhof-AOML rik.wanninkhof@noaa.gov
CFC John Bullister-PMEL bullister@pmel.noaa.gov
CFC Mark Warner-UW mwarner@ocean.washington.edu
HCFs Shari Yvon-Lewis-AOML syvon@aoml.noaa.gov
He/Tr Peter Schlosser peters@ldeo.columbia.edu
14C/13C Ann McNichol WHOI amcnichol@whoi.edu
The data included in these files are preliminary, and are subject to final calibration and processing. They have made available for public access as soon as possible following their collection. Users should maintain caution in their interpretation and use. Following American Geophysical Union recommendations, the data should be cited as: "data provider(s), cruise name or cruise ID, data file name(s), CLIVAR and Carbon Hydrographic Data Office, La Jolla, CA, USA, and data file date." For further information, please contact one of the parties listed above or whpo@ucsd.edu. Users are also requested to acknowledge the NSF/NOAA-funded U.S. Repeat Hydrography Program in publications resulting from their use.
A16N preliminary CTD data files in WOCE format are ready for you on our FTP site: ftp.pmel.noaa.gov under /ctd/woce/a16n.
I have received your files and am checking them over.
This is from John Bullister and is the project instructions document for A16N_2003a (Ron Brown). It's the closest thing that he had to cruise docs, but he's working on a preliminary post-cruise report. When he completes the work-in-progress, we should replace the new doc with the one he's working on now.
You have my permission to obtain the data from Frank and post them at the website. You should include the caveats that these data are the raw shipboard version, are still preliminary and will be updated.
Here is the current parameter list for the 2003 A16N son-of-WOCE cruise.
Kristin Sanborn of ODF gave me the list. She has been working with Bob Williams on preparations for the bottle data processing on that cruise. Of course some of the water samples generate many individual parameters. An asterisk after a value indicates it comes from the CTD computer. An f before a value indicates it's a flag.
stnnbr
castno
sampno (niskin number + castno*100)
btlnbr (bottle serial number)
lat (decimal degrees)
lon (decimal degrees)
year*
month*
day*
hour*
min*
second* (decimal seconds)
ctdprs*
ctdsal*
fctdsal
ctdtmp*
ctdoxy*
fctdoxy
trans* (Bishop tranmissometer)
pic* (Bishop particulate inorganic carbon)
scatter* (Bishop scatter meter)
sigma0*
theta*
cfc11
fcfc11
cfc12
fcfc12
cfc13
fcfc13
ccl4
fccl4
hcfc22 (AOML HCFC-22)
fhcfc22
ch3cl (methyl chloride)
fch3cl
ch3br (methyl bromide)
fch3br
aomlcfc11 (AOML cfc-11)
faomlcfc11
hcfc141b (AOML HCFC-141b)
fhcfc141b
ch3i (methyl iodide)
fch3i
aomlcfc13 (AOML cfc13)
faomlcfc13
aomlccl4 (AOML ccl4)
faomlccl4
tcarbn
ftcarbn
pco2
fpco2
nitrat
fnitrat
nitrit
fnitrit
phspht
fphspht
silcat
fsilcat
oxygen
foxygen
hel3
fhel3
tritum
ftritum
alkali
falkali
ph
fph
doc
fdoc
don
fdon
There appear to be two different CFC groups working at the same time on A16N, each apparently drawing their own samples.